BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C02SP1|AL427280
(687 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1576 886 0.0
>3x_Contig1576
Length = 13648
Score = 886 bits (447), Expect = 0.0
Identities = 460/463 (99%), Gaps = 1/463 (0%)
Strand = Plus / Minus
Query: 1 gatcaatatgaaaggacagtcgccgatttatatttaagggtttggtgccattggcagttt 60
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 463 gatcaatatgacaggacagtcgccgatttatattttagggtttggtgccattggcagttt 404
Query: 61 acttggtgttcatctgcaaaagtatggaggtagaaaagttattccaatattcagatcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 acttggtgttcatctgcaaaagtatggaggtagaaaagttattccaatattcagatcttt 344
Query: 121 ggacagactcaacgaattcaagaaacttgattgcaagattacaatcaaacctttgttcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggacagactcaacgaattcaagaaacttgattgcaagattacaatcaaacctttgttcga 284
Query: 181 tgcgagtttatctcccttaacagagcaatttcaaagtgcgacgtgccccggcatcttcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgcgagtttatctcccttaacagagcaatttcaaagtgcgacgtgccccggcatcttcca 224
Query: 241 aggcaaaatcgataatttgatcgtcacttgtaagacatatcaaacggctgaggcattgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aggcaaaatcgataatttgatcgtcacttgtaagacatatcaaacggctgaggcattgaa 164
Query: 301 aatgtttctgccgtaccttcacaacgacactaacatcatcatgattcaaaacggactcgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aatgtttctgccgtaccttcacaacgacactaacatcatcatgattcaaaacggactcgg 104
Query: 361 tgtcgctgaagtgttgaaggaacaagtcttcacaggaagcgacttacaatcaaattt-gt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 103 tgtcgctgaagtgttgaaggaacaagtcttcacaggaagcgacttacaatcaaatttagt 44
Query: 420 tccaaggtgtcattggccatggtattttccaagataaagagat 462
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 tccaaggtgtcattggccatggtattttccaagataaagagat 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5793
Number of Sequences: 1807
Number of extensions: 5793
Number of successful extensions: 128
Number of sequences better than 1.0e-20: 1
length of query: 687
length of database: 10,358,551
effective HSP length: 16
effective length of query: 671
effective length of database: 10,329,639
effective search space: 6931187769
effective search space used: 6931187769
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)